PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0212s0029.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 126aa    MW: 14263.9 Da    PI: 6.2653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0212s0029.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-201970256
                  AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56
                         +y+GVr ++ +g+++AeIrd      ++ +r++lg+fgtaeeAa+a+++a+ +++g+
  Kalax.0212s0029.1.p 19 KYRGVRCRP-WGKYAAEIRD----SaRHgARVWLGTFGTAEEAARAYDKAAYSMRGH 70
                         8*****999.**********....33236**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.7081977IPR001471AP2/ERF domain
PfamPF008473.9E-151970IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-231978IPR016177DNA-binding domain
CDDcd000186.03E-271978No hitNo description
Gene3DG3DSA:3.30.730.101.1E-301979IPR001471AP2/ERF domain
SMARTSM003801.1E-311983IPR001471AP2/ERF domain
PRINTSPR003676.4E-112031IPR001471AP2/ERF domain
PRINTSPR003676.4E-114359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MAGKEEQCQR NVSGESVVKY RGVRCRPWGK YAAEIRDSAR HGARVWLGTF GTAEEAARAY  60
DKAAYSMRGH MAVLNFPEEY GLRPKKSHET SSASSSRKEV FEFECLDDEL LDEMLRDTND  120
QPPQW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-262077663ATERF1
3gcc_A5e-262077663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851053.14e-40PREDICTED: ethylene-responsive transcription factor 14-like
SwissprotQ9LTC54e-38ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A0E0M4T43e-41A0A0E0M4T4_ORYPU; Uncharacterized protein
STRINGGLYMA20G34560.12e-39(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.17e-26ERF family protein